All functions 


LD block architecture for European populations (hg19). 

LD block architecture for European populations (hg38). 

Download 1000 Genomes Phase III panel 

Finding a file in an FTP directory This is an internal function to help 

Retrieve GWAS summary datasets from GWAS catalog ' 

Helper function to sum logs without loss of precision 

Subset of Michailidou BRCA GWAS sumstat dataset. 

Subset of Michailidou BRCA GWAS sumstat dataset. 

Compute PGS from GWAS summary statistics using Bayesian sum of singleeffect (SuSiE) linear regression using z scores 

Compute PGS from GWAS summary statistics using posteriors from Wakefield's approximate Bayes Factors 

Compute Standard deviation prior (SD prior) for quantitative traits using precomputed heritability. 

Estimate trait variance, internal function 

compute posterior probabilities using Wakefield's approximate Bayes Factors 

Compute posterior probabilities using Wakefield's approximate Bayes Factors for quantitative traits 